Journal of Medicinal and Aromatic Plant Sciences

Volume: 41 Issue: 1

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  • Review Article

Maintenance of a balanced human gut microbiota - an emerging healthcare destination for herbal research

AJAY KUMAR MATHUR*, ARCHANA MATHUR

*Corresponding author, E-mail: [email protected]
CSIR-Central Institute of Medicinal and Aromatic Plants (CSIR-CIMAP), PO CIMAP, Lucknow-226022
 

Year: 2019, Page: 1-30, Doi: https://doi.org/10.62029/jmaps.v41i1.Mathur

Received: Oct. 16, 2019 Accepted: Dec. 4, 2019 Published: Dec. 31, 2019

Abstract

The human gastrointestinal tract harbors a complex and dynamic population of micro-organisms known as 'gut microbiota'. The gut micro-organisms exert great influence on us during the states of metabolic/immunological homeostasis as well as manifestation of or protection from diseases. Relative composition of gut microbiota is now known to be influenced by the type of diet, geographic locations and nutritional status of the individuals. Gut microbiota most closely interact with the gastrointestinal tract, liver, skin and central nervous system and hence, aid in physiological functions such as digestion and absorption of nutrients, neuro-transmission, fat metabolism, and immune responses. Accordingly, disturbance in the gut microflora architecture normally lead to several health disorders like obesity, diabetes, hypertension, rheumatoid arthritis, inflammatory bowel disease, nervous depression, anxiety, cognitive decline, Parkinson's Disease etc. The metagenomic studies of human gut flora have suggested that the bulk of the microbial community is made up of nine bacteriophyta namely: Firmicutes, Bacteroidetes, Proteobacteria, Actinobacteria, Fusobacteria, Verrucomicrobia, Cyanobacteria and Spirochaetes. Several studies have also indicated a positive association of gut microbes with bidirectional regulation of intestinal and central nervous system (CNS) through neurotransmitter, endocrine, immune and metabolic pathways. An imbalanced gut microbiota has been shown to affect the progression of CNS diseases, including cerebral ischemia, Alzheimer's disease, disseminated sclerosis and hepatic encephalopathy. In addition, gut microbiota imbalance can also increase intestinal permeability that can lead to liver toxicity and several other pathophysiological complications. Intestinal microbiota contributes to diverse mammalian processes including the metabolic function of the drugs, both traditional as well as modern.
A large number of herbal medicines have been found to act in association with gut microbiota because majority of herbal drugs are orally administered and invariably come in direct contact with these microbes. Since most herbal preparations are made up of a large number of plant-derived bioactive metabolites, their precise mode of actions on gut flora, body metabolism and disease management/treatment is often not fully explained. Recent developments in the field of gut metagenomics vis-à-vis bioavailability of herbal ingredients and their pharmacodynamics in disease conditions are providing fresh insights to these associations. Today a general consensus is that most traditional herbals treat disease by three primary modes: getting metabolized into more pharmacologically active metabolites by the action of gut microbiota; regulating the gut microbiota balance in terms of relative population of different bacteria particularly the Firmicutes-to-Bacteroidetes ratio (F/B); and by regulating the synthesis of fermentation products of the gut microbes such as acetate, butyrate and propionate etc. 

The gut micro-flora architecture and its association with herbal medicines is a hot topic of discussion today. In last five years >13000 papers were published on studies related to gut microbiota. This review is an attempt to summarize our current understanding of this subject with sole intention of sensitizing the researchers' community of medicinal and aromatic plant sciences in India to validate and valorize our existing AYUSH prescriptions in the context of gut microbiota influences for enhancing their global acceptance.
 

Keywords: Bacteroidetes (F/B) ratio, Disease manifestation & management, Dysbiosis, Firmicutes, Gut microbiota, Herbal medicines

References

Adams JB, Johansen LJ, Powell, LD, Quig, D, Rubin RA. 2011. Gastrointestinal flora and gastrointestinal status in children with autism – comparisons to typical children and correlation with autism severity. BMC Gastroenterol 11: 22. doi: 10.1186/1471- 230x-11-22.

Ajouz H, Mukherji D, Shamseddine A. 2014. Secondary bile acids: an under recognized cause of colon cancer. World J Surg Oncol 12: 164. doi: 10.1186/1477-7819-12-164

Andreasen AS, Larsen N, PedersenSkovsgaard T, Berg RM, Møller K, Svendsen KD, Jakobsen  M, Pedersen  BK.  2010. Effects of Lactobacillus acidophilus NCFM on insulin sensitivity and the systemic inflammatory response in human subjects. British J Nutr 104: 1831–1838.

Andres E, Loukili NH, Noel E, Kaltenbach G, Abdelgheni MB, Perrin AE, Noblet-Dick M, Maloisel F, Schlienger JL, Blicklé JF. .2004. Vitamin B12 (cobalamin) deficiency in elderly patients. Can Med Assoc J 171: 251–259. doi: 10.1503/cmaj.1031155.

Arnold M, Sierra MS, Laversanne M, Soerjomataram I, Jemal A, Bray F. 2017. Global patterns and trends in colorectal cancer incidence and mortality. Gut 66: 683– 691. doi: 10.1136/gutjnl-2015-310912.

Backhed F, Ding H, Wang T, Hooper LV, Koh GY, Nagy A, Semenkovich CF, Gordon JI. 2004. The gut microbiota as an environmental factor that regulates fat storage. Proc Natl Acad Sci USA 101: 15718–15723. doi: 10.1073/pnas.0407076101.

Baeg IH, So SH. 2013. The world ginseng market and the ginseng (Korea). J Ginseng Res 37: 1–7. https://doi.org/10.5142/jgr. 2013.37.1.

Banack HR, Kaufman JS. 2014. The obesity paradox: understanding the effect of obesity on mortality among individuals with cardiovascular disease. Prev Med 62: 96– 102. https://doi.org/10.1016/j.ypmed. 2014.02.003.

Barnaba V, Sinigaglia F. 1997. Molecular mimicry and T cell–mediated autoimmune disease. J Exp Med 185: 1529–1532. doi: 10.1084/jem.185.9.1529.

Bartlett JG. 1981. Antimicrobial agents implicated in Clostridium difficile toxinassociated diarrhea or colitis. Johns Hopkins Med J 149: 6-9.

Becattini S, Taur Y, Pamer EG. 2016. Antibiotic-induced changes in the intestinal microbiota and disease. Trends Mol Med 22: 458–478.

Bervoets L, Van Hoorenbeeck K, Kortleven I, Van Noten C, Hens N, Vael C, Goossens H, Desager KN, Vankerckhoven V. 2013. Differences in gut microbiota composition between obese and lean children: a crosssectional study. Gut Pathog 5: 10. https:// doi.org/10.1186/ 1757-4749-5-10.

Bianchi F, Ana L, Rocha Faria Duque, Susana Marta Isay Saad, Katia Sivieri. 2019. Gut microbiome approaches to treat obesity in humans. Appl Microbiol Biotech 103:1081– 1094.

Bianchi F, Larsen N, Tieghi TDM, Angela M, Adorno T, Kot W, Marta S, Saad I, Jespersen L, Sivieri K. 2018. Modulation of gut microbiota from obese individuals by in vitro fermentation of citrus pectin in combination with Bifidobacterium longum BB-46. Appl Microbiol Biotechnol 20: 8827–8840.

Biswas T, Ajayakumar PV, Mathur AK, Mathur A. 2015. Solvent-based extraction optimization for efficient ultrasonicationassisted ginsenoside recovery from Panax quinquefolius and P. Sikkimensis cell suspension lines. Natural Product Res 29: 1256–1263. https://doi.org/10.1080/ 14786419.2015.1024119.

Bomhof MR, Reimer RA. 2015. Pro- and prebiotics: The role of gut microbiota in obesity. In: Probiotics and Prebiotics: Current Research and Future Trends (Eds Venema K, do Carmo AP), pp 363–380, Caister Academic Press.

Boxun Zhang , Rensong Yue , Yuan Chen, Maoyi Yang , Xiaoying Huang, Jiacheng Shui, Yuliang Peng, Jiawei Chin. 2019. Gut microbiota, a potential new target for Chinese herbal medicines in treating diabetes mellitus. Evidence-Based Complementary Alternative Medicine 1: 11. https://doi.org/10.1155/2019/ 2634898.

Brandão BPA, Abreu IC, Aimbire F, Higa ME, Casali A, Ferreira FG, Albuquerque RCM, Santos LB, Irigoyen MCC, Casali KR, Cunha ST. 2018. Saccharomyces boulardii attenuates autonomic cardiovascular dysfunction and modulates inflammatory cytokines in diabetic mice. Diabetes 67: (Supplement 1). https://doi.org/10.2337/ db18-2365-PUB.

Brussow H. 2015. Growth promotion and gut microbiota: insights from antibiotic use. Environ Microbiol 17: 2216–2227.

Burokas A, Arboleya S, Moloney RD, Peterson VL, Murphy K, Clarke G, Stanton C, Dinan TG, Cryan JF. 2017. Archival report targeting the microbiota-gut-brain axis: prebiotics have anxiolytic and antidepressantlike effects and reverse the impact of chronic stress in mice. Biol Psychiatry 82: 472–487. doi: https://doi.org/10.1016/j. biopsych. 2016. 12.031.

Cani PD, Bibiloni R, Knauf C, Neyrinck AM, Delzenne NM. 2008. Changes in gut microbiota control metabolic diet–induced obesity and diabetes in mice. Diabetes 57: 1470–1481. https://doi.org/10. 2337/db07- 1403.

Cani PD, Neyrinck AM, Fava F, Knauf C, Burcelin  RG, Tuohy  KM, Gibson  GR, Delzenne NM. 2007. Selective increases of bifidobacteria in gut microflora improve highfat-diet-induced diabetes in mice through a mechanism associated with endotoxaemia. Diabetologia 50: 2374–2383.

Carabotti M, Scirocco A, Maselli MA, Severi C. 2015. The gut-brain axis: Interactions between enteric microbiota, central and enteric nervous systems. Ann Gastroenterol 28: 203–209. https://doi.org/ 10.1038/ ajgsup.2012.3.

Cassandra W. 2018. When drugs unintentionally affect gut bugs. Nature Rev Drug Discov 17: 383-384. doi:10.1038/ nrd.2018.88.

Chen J, Guo Y, Gui Y, Xu D. 2018b. Physical exercise, gut, gut microbiota, and atherosclerotic cardiovascular diseases. Lipids Health Dis 17:1–7. https://doi.org/ 10.1186/s12944-017-0653-9.

Christensen KR, Steenholdt C, Buhl SS, Ainsworth MA, Thomsen O, Brynskov J. 2015. Systematic information to health-care professionals about vaccination guidelines improves adherence in patients with inflammatory bowel disease in anti-TNF-á therapy. Am J Gastroenterol 110: 1526–1532. doi: 10.1038/ajg.2015.162.

Christensen L, Roager HM, Astrup A, Hjorth MF. 2018. Microbial enterotypes in personalized nutrition and obesity management. Am J Clin Nutr 108: 1–7. https:/ /doi.org/10.1093/ajcn/nqy175.

Christensen LP. 2009. Ginsenosides chemistry, biosynthesis, analysis and potential health effects. Adv Food Nutr Res 55: 1–99. doi.org/10.1016/S1043-4526(08) 00401-4.

Chunlong Mu, Weiyun Zhu. 2019. Antibiotic effects on gut microbiota, metabolism, and beyond. Appl Microbiol Biotech 103: 9277– 9285. doi.org/10.1007/s00253-019-10165-x.

Clarke SF, Murphy EF, Sullivan OO, Lucey AJ, Humphreys M, Hogan A, Hayes P, Reilly MO, Jeffery IB, Wood-martin R, Kerins DM, Quigley E, Ross RP, Toole PWO, Molloy MG, Falvey E, Shanahan F, Cotter PD. 2014. Exercise and associated dietary extremes impact on gut microbial diversity. Gut 63: 1913–1920. doi.org/10. 1136/gutjnl-2013- 306541.

Codella R, Luzi L, Terruzzi I. 2018. Exercise has the guts: how physical activity may positively modulate gut microbiota in chronic and immune-based diseases. Dig Liver Dis 50: 331–341. https://doi.org/ 10.1016/ j.dld.2017.11.016.

Constantino JN, Przybeck T, Friesen D, and Todd RD. 2000. Reciprocal social behavior in children with and without pervasive developmental disorders. J Dev Behav Pediatr 21: 2–11. doi: 10.1097/00004703- 200002000-00002.

Costa A, Leite G, Resende A, Blachier F. 2017. Exercise, nutrition and gut microbiota: possible links and consequences. Int J Sport Exerc Med 3: 1–8. doi.org/10.23937/2469- 5718/1510069.

Court WE. 2000. Introduction to ginseng. In: Ginseng—The genus Panax. (Ed. Hardman R), pp. 1–11, Hardwood Academic Publishers, Netherlands.

Cui C, Li Y, Gao H, Zhang H, Han J, Zhang D, Li Y, Zhou J, Lu C, Su X. 2017. Modulation of the gut microbiota by the mixture of fish oil and krill oil in high-fat diet-induced obesity mice. PLoS One 12: 1–18.

De Palma G, Nadal I, Collado MC, Sanz Y. 2009. Effects of a gluten-free diet on gut microbiota and immune function in healthy adult human subjects. Br J Nutr  102: 1154- 60. doi: 10.1017/ S0007114509371767.

Degnan PH, Taga, ME, Goodman AL. 2014.Vitamin B12 as a modulator of gut microbial ecology. Cell Metab 20: 769–778. doi: 10.1016/j.cmet.2014.10.002.

Denou E, Marcinko K, Surette MG, Steinberg GR, Schertzer JD. 2018. High-intensity exercise training increases the diversity and metabolic capacity of the mouse distal gut microbiota during diet-induced obesity. Am J Physiol Endocrinol Metab 310: 982–993. https://doi. org/10.1152/ajpendo.00537.2015.

Dewulf EM, Cani PD, Neyrinck AM, Possemiers S, Holle AV, Muccioli GG, Deldicque L, Bindels LB, Pachikian BD, Sohet  FM, Mignolet  E, F rancaux M, Larondelle Y, Delzenne NM. 2011. Inulintype fructans with prebiotic properties counteract GPR43 over-expression and PPARg-related adipogenesis in the white adipose tissue of high-fat diet-fed mice. J Nutr Biochem 22: 712–722. doi: 10.1016/j. jnutbio.2010.05.009.

Domingueti CP, Dusse LMS, Carvalho MDG, De Sousa LP, Gomes KB, Fernandes AP. 2016. Diabetes mellitus: The linkage between oxidative stress, inflammation, hypercoagulability and vascular complications. J Diabetes and its Complications 30: 738–745.

Elizabeth T, Nathalie J. 2017. Introduction to the human gut microbiota. Biochem J 474 : 1823–1836.

Erny D, de Angelis, ALH, Jaitin D, Wieghofer P, Staszewski O, David E, Keren-Shaul H, Mahlakoiv  T, Jakobshagen  K, Buch T, Schwierzeck  V, Utermöhlen  O, Chun E, Garrett  WS, McCoy  KD, Diefenbach A, Staeheli  P, Stecher  B, Amit I, Prinz  M. 2015. Host microbiota constantly control maturation and function of microglia in the CNS. Nat Neurosci 18: 965–977. doi: 10.1038/ nn.4030.

Feagan BG, Rutgeerts P, Sands BE, Hanauer S, Colombel JF, Sandborn WJ. Assche GV, Axler J, Hyo-Jong KSD, Fox I, Serap Sankoh CM, Wyant T, Xu J, Parikh A. 2013. Vedolizumab as induction and maintenance therapy for ulcerative colitis. N Engl J Med 369: 699–710. doi: 10.1056/ NEJMoa1215734.

Forslund HK, V Tremaroli, Nookaew I, Bergström G, Behre CJ, Fagerberg B, Nielsen  J, Bäckhed  F.  2013.  Gut metagenome in European women with normal, impaired and diabetic glucose control. Nature 498: 99–103.

Fishbein T, Novitskiy G, Mishra L, Matsumoto C, Kaufman S, Goyal S, Shetty K, Johnson L, Lu A, Wang A, Hu F, Kallakury B, Lough D, Zasloff M. 2008. NOD2-expressing bone marrow-derived cells appear to regulate epithelial innate immunity of the transplanted human small intestine. Gut 57: 323–330.

Gao Z, Li Q, Wu X, Zhao X, Zhao L, Tong X. 2017. New insights into the mechanisms of chinese herbal products on diabetes: a focus on the “Bacteria-mucosal immunity inflammation- diabetes “axis.” J Immun Res Article ID 1813086, 13 pages.

Gao Z, Yin J, Zhang J et al. 2009. Butyrate improves insulin sensitivity and increases energy expenditure in mice. Diabetes 58: 1509–1517.

Geleijnse JM, Vermeer C, Grobbee DE, Schurgers LJ, Knapen MH, van der Meer IM, Hofman A, Witteman JC. 2004. Dietary intake of menaquinone is associated with a reduced risk of coronary heart disease: The Rotterdam study. J Nutr 134: 3100–3105. doi: 10.1093/jn/134.11.3100.

Gibson GR, Hutkins R, Sanders ME, Prescott SL, Reimer RA, Salminen SJ, Scott K, Stanton C, Swanson KS, Cani PD, Verbeke K, Reid G. 2017. Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics. Nat Rev Gastroenterol Hepatol 14: 491–502. https:// doi.org/10.1038/ nrgastro.2017.75.

Gill SR, Pop M, Deboy RT, Eckburg PB, Turnbaugh PJ, Samuel BS, Gordon JI, Relman DA, Fraser- Liggett CM, Nelson KE. 2006. Metagenomic analysis of the human distal gut microbiome. Science 312: 1355– 1359.

Gominak S. 2016. Vitamin D deficiency changes the intestinal microbiome reducing B vitamin production in the gut. The resulting lack of pantothenic acid adversely affects the immune system, producing a “proinflammatory” state associated with atherosclerosis and autoimmunity. Med Hypotheses 94: 103–107. doi: 10.1016/ j.mehy.2016.07.007.

Guglielmi G. 2018. Gut microbes join the fight against cancer. Nature 557: 482-484.

Hang S, Donggi P, Lina Y, Eunha K, Trinath J, Lu J, Ha S, Brandon NN, Kelly SP, Lin W, Zheng Y, Longman RS, Fraydoon R, Sloan Devlin A, Krout MR, Michael AF, Littman DR, Jun  RH. 2019.  Bile  acid  metabolites control TH17 and Treg cell differentiation. Nature doi:10.1038/s41586-019-1785-z.

Hasegawa H. 2004. Proof of the mysterious efficacy of ginseng: Basic and clinical trials: Metabolic activation of ginsenoside: Deglycosylation by intestinal bacteria and esterification with fatty acid. J Pharmacol Sci 95: 153–157.

Hill C, Guarner F, Reid G, et al. 2014. Expert consensus document. The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic. Nat Rev Gastroenterol Hepatol 11: 506–514.

Hooper LV, Gordon JI. 2001. Commensal host-bacterial relationships in the gut. Science 292: 1115–1118. doi: 10.1126/ science.1058709.

Ianiro G, Tilg H, Gasbarrini A. 2016. Antibiotics as deep modulators of gut microbiota: between good and evil. Gut 65: 1906–1915.

Ieraci A, Forni PE, Ponzetto C. 2002. Viable hypomorphic signalling mutant of the met receptor reveals a role for hepatocyte growth factor in postnatal cerebellar development. Proc Natl Acad Sci USA 99: 15200–15205. doi: 10.1073/pnas.222362099.

Jaehong H. 2019. Chemical aspects of gut metabolism of flavonoids. Metabolites 9: 136- 141.

Jia W, Li H, Zhao L, Nicholson JK. 2008. Gut microbiota: a potential new territory for drug targeting. Nat Rev Drug Discov 7: 123–129.

Johansson MEV, Phillipson M, Petersson J, Velcich A, Holm L, Hansson GC. 2008. The inner of the two Muc2 mucin-dependent mucus layers in colon is devoid of bacteria. Proc Natl Acad Sci USA 105: 15064–15069. doi: 10.1073/pnas.0803124105.

Juanita B. 2019. Babies get critical gut bacteria from their mother at birth, not from placenta, study suggests. doi:10.1126/ science.aay9546.

Kasai C, Sugimoto K, Moritani I, Tanaka J, Oya Y, Inoue H, Tameda M, Shiraki K, Ito M, Takei Y, Takase K. 2015. Comparison of the gut microbiota composition between obese and non-obese individuals in a Japanese population, as analyzed by terminal restriction fragment length polymorphism and nextgeneration sequencing. BMC Gastroenterol 15: 100. https://doi.org/10.1186/s12876-015- 0330-2.

Kawashima H, Nakajima Y, Matubara Y, Nakanowatari J, Fukuta T, Mizuno S, Takahashi S, Tajima T, Nakamura T. 1997. Effects of vitamin K2 (menatetrenone) on atherosclerosis and blood coagulation in hypercholesterolemic rabbits. Jpn JPharmacol 75: 135–143. doi: 10.1254/ jjp.75.135.

Kho ZY, Lal SK. 2018. The human gut microbiome – A potential controller of wellness and disease. Front Microbiol 9: Article No. 1835. doi: 10.3389/fmicb. 2018. 01835.

Khosravi A, Yáñez A, Price JG, Chow A, Merad M, Goodridge HS. Mazmanian SK. 2014. Gut microbiota promote hematopoiesis to control bacterial infection. Cell Host Microbe 15: 374– 381. doi: 10.1016/j.chom.2014.02.006.

Kim, SH, Lord C. 2012. New autism diagnostic interview-revised algorithms for toddlers and young preschoolers from 12 to 47 months of age. Metabolites 9: 136-341.

Koliada A, Syzenko G, Moseiko V, Budovska L, Puchkov K, Perederiy V, Gavalko Y, Dorofeyev A, Romanenko M, Tkach S, Sineok L, Lushchak O, Vaiserman A. 2017. Association between body mass index and Firmicutes/Bacteroidetes ratio in an adult Ukrainian population. BMC Microbiol 17: 4– 9. https://doi.org/10.1186/s12866- 017-1027-1.

Kullberg MC. 2008. Immunology: Soothing intestinal sugars. Nature 453: 602–604.

Lambert JE, Myslicki JP, Bomhof MR, Belke DD, Shearer J, Reimer RA. 2015. Exercise training modifies gut microbiota in normal and diabetic mice. Appl Physiol Nutr Metab 40: 479–452. https://doi. org/10.1139/apnm2014-0452.

Lennard-Jones JE. 1989. Classification of inflammatory bowel disease. Scand J Gastroenterol 24: 2–6. doi: 10.3109/ 00365528909091339.

Ley RE, Turnbaugh PJ, Klein S, Gordon JI. 2006. Microbial ecology: human gut microbes associated with obesity. Nature 444: 1022– 1023. doi: 10. 1038/4441022a.

Li H, Zhou M, Zhao A, Jia W. 2009. Traditional Chinese medicine: balancing the gut ecosystem. Phytother Res 23: 1332–1335.

Li Y, Kundu P, Seow SW, de Matos CT, Aronsson L, Chin KC, Kärre K, Pettersson S, Greicius  G.  2012.  Gut  microbiota accelerate tumor growth via c-jun and STAT3 phosphorylation in APC Min/+ mice. Carcinogenesis 33: 1231–1238. doi: 10. 1093/ carcin/bgs137.

Liu D, Zhang Y, Liu Y. Hou L, Li S, Tian H, Zhao T. 2018. Berberine modulates gut microbiota and reduces insulin resistance via the TLR4 signaling pathway. Exp Clinical Endocr Diabetes 126: 513–520.

Liu HF, Yang JL, Du FF, Gao XM, Ma XT, Huang YH, Xu F, Niu W, Wang FQ, Mao Y, Sun Y, Lu T, Liu CX, Zhang BL, Li C. 2009. Absorption and disposition of ginsenosides after oral administration of Panax notoginseng extract to rats. Drug Metab Dispos 37: 2290– 2298.

Liu J, Wu M, He J, Xiao C, Xue Y, Fu T, Lin C, Dong D, Li Z. 2018. Antibiotic-induced dysbiosis of gut microbiota impairs corneal nerve regeneration by affecting CCR2- negative macrophage distribution. Am J Pathol 188: 2786–2799.

Lloyd-Price J, Abu-Ali G, Huttenhower C. 2016. The healthy human microbiome. Genome Med 8: 51. doi: 10.1186/s13073- 016-0307-y.

Longfei Lin, Liyu Luo, Ming Zhong, Tanggui Xie, Yuling Liu, Hui Li, Jian Ni. 2019. Gut microbiota: a new angle for traditional herbal medicine research. RSC Adv 9: 17457– 17472.

Louis P, Young P, Holtrop G, Flint HJ. 2010. Diversity of human colonic butyrateproducing bacteria revealed by analysis of the butyryl- CoA:acetate CoA-transferase gene. Environ Microbiol 12: 304–314. https:// doi.org/10.1111/j.1462-2920.2009.02066.x.

Maier L, Pruteanu M, Kuhn M, Zeller G, Telzerow A, Anderson EE, Brochado AR, Fernandez KC, Dose H, Mori H, Patil KR, Bork P, Typas A. 2019. Extensive impact of non-antibiotic drugs on human gut bacteria. Nature DOI: 10.1038/nature25979.

Mar QM, Araceli MG, Francisco JT, Isabel MI. 2019. A new perspective on the health benefits of moderate beer consumption: Involvement of the gut microbiota. Metabolites 9: pii: E272. doi: 10.3390/metabo9110272.

Marasco G, Di Biase AR, Schiumerini R, Eusebi LH, Iughetti L, Ravaioli F, Scaioli E, Colecchia A, Festi D. 2016. Gut microbiota and celiac disease. Dig Dis Sci 61: 1461– 1472. doi: 10.1007/s10620-015-4020-2.

Mateus KS, Liliane GSO, Giselle NC, Fernanda B. Katia S. 2019. Relationship between gut microbiota, probiotics, and type 2 diabetes mellitus. Appl Microbio Biotech 103: 9229–9238.

McDonald B, McCoy KD. 2019. Maternal microbiota in pregnancy and early life. Science 365: 984-985. DOI: 10.1126/ science.aay0618.

Min SC, Jeon KK, Dong HK, Hye HY. 2019. Effects of gut microbiota on the bioavailability of bioactive compounds from Ginkgo leaf extracts. Metabolites 9: pii: E132. doi: 10.3390/metabo9070132.

Monda V, Villano I, Messina A, Valenzano A, Esposito T, Moscatelli F, Viggiano A, Cibelli G, Chieffi S, Monda M, Messina G. 2017. Exercise modifies the gut microbiota with positive health effects. Oxidative Med Cell Longev 2017: 3831972. doi: 10.1155/2017/ 3831972. Epub 2017 Mar 5.

Murota K, Nakamura Y, Uehara M. 2018. Flavonoid metabolism: The interaction of metabolites and gut microbiota. Biosci Biotechnol Biochem 82: 600–610.

Mustalahti K, Catassi C, Reunanen A, Fabiani E, Heier M, McMillan S, Murray L, Metzger MH, Gasparin M, Bravi E, Mäki M, Coeliac EU Cluster, 2010. The prevalence of celiac disease in Europe: results of a centralized, international mass screening project. Ann Med 42: 587–595. doi: 10.3109/ 07853890.2010.505931.

Nadal I, Donant E, Ribes-Koninckx C, Calabuig M, Sanz Y. 2007. Imbalance in the composition of the duodenal microbiota of children with coeliac disease. J Med Microbiol 56: 1669–1674. doi: 10.1099/jmm.0.47410-0.

Nagao-Kitamoto H, Shreiner AB, Gillilland MG, Kitamoto S, Ishii C, Hirayama A, Kuffa P, El-Zaatari  M, Grasberger  H, Seekatz AM, Higgins PD, Young VB, Fukuda S, Kao JY, Kamada  N.  2016.  Functional characterization of inflammatory bowel disease–associated gut dysbiosis in gnotobiotic mice. Cell Mol Gastroenterol Hepatol 2: 468–481.

Newsholme P, Cruzat VF, Keane KN, Carlessi BPI. 2016. Molecular mechanisms of ROS production and oxidative stress in diabetes. Biochem J 473: 4527–4550. https://doi.org/ 10.1042/ BCJ20160503C.

Nicolucci AC, Hume MP, Martínez I, Mayengbam S, Walter J, Reimer RA. 2017. Prebiotics reduce body fat and alter intestinal microbiota in children who are overweight or with obesity. Gastroenter 153: 711–722. https://doi.org/10.1053/j.gastro.2017.05.055.

Nie Q, Hu J, Gao H, Fan L, Chen H, Nie S. 2019. Polysaccharide from Plantago asiatica L. attenuates hyperglycemia, hyperlipidemia and affects colon microbiota in type 2 diabetic rats. Food Hydrocolloids 86: 34–42.

Nie YF, Hu J, Yan X-H. 2015. Cross-talk between bile acids and intestinal microbiota in host metabolism and health. J Zhejiang Univ Sci B 16: 436–446. doi: 10.1631/ jzus.b1400327.

Nishioku T, Matsumoto J, Dohgu S, Sumi N, Miyao K, Takata F, Shuto H, Yamauchi A, Kataoka Y. 2010. Tumor necrosis factor-a mediates the blood–brain barrier dysfunction induced by activated microglia in mouse brain microvascular endothelial cells. J Pharmacol Sci 112: 251–254. doi: 10.1254/jphs.09292sc.

O’Connor S, Chouinard-Castonguay S, Gagnon C, Rudkowska I. 2017. Prebiotics in the management of components of the metabolic syndrome. Maturitas 104: 11–18. https://doi.org/10.101 6/j.maturitas. 2017.07.005.

Ohshima T, Kojima Y, Seneviratne CJ, Maeda N. 2016. Therapeutic application of synbiotics, a fusion of probiotics and prebiotics, and biogenics as a new concept for oral Candida infections: a mini-review. Front Microbiol 7: 1–8. https://doi.org/ 10.3389/fmicb.2016. 00010.

Okunishi K, Dohi M, Nakagome K, Tanaka R, Mizuno S, Matsumoto K. Miyazaki J, Nakamura T, Yamamoto K. 2005. A novel role of hepatocyte growth factor as an immune regulator through suppressing dendritic cell function. J Immunol 175: 4745– 4753. doi: 10.4049/jimmunol.175.7.4745.

Palmer C, Bik EM, DiGiulio DB, Relman DA, Brown PO. 2007. Development of the human infant intestinal microbiota. PLoS Biol 5: 177.

Patrice D Cani,Cani PD. 2018. Human gut microbiome: hopes, threats and promises. Rec Adv Basic Sci 67: 1716–1725 doi:10.1136/gutjnl-2018-316723.

Pennisi E. 2019. Chemicals released by bacteria may help gut control the brain, mouse study suggests. Biology, Brain and Behaviour doi:10.1126/science.aaz9615.

Peters BA, Shapiro JA, Church TR, Miller G, Trinh-Shevrin C, Yuen E, Friedlander C, Hayes RB, Ahn J. 2018. A taxonomic signature of obesity in a large study of American adults. Sci Rep 8: 9749. https:// doi.org/10.1038/s41598-018-28126-1.

Peterson CT, Vaughn AR, Sharma V, Chopra D, Mills PJ, Peterson SN, Sivamani RK. 2018. Effects of turmeric and curcumin dietary supplementation on human gut microbiota: a double-blind, randomized, placebocontrolled pilot study. J Evid Based Integr Med 23: 2515690X18790725. doi: 10.1177/ 2515690X18790725.

Qi LW, Wang CZ, Yuan CS. 2010. American ginseng: potential structure-function relationship in cancer chemoprevention. Biochem Pharmacol 80: 947–954.

Qi LW, Wang CZ, Yuan CS. 2011. Ginsenosides from American ginseng: Chemical and pharmacological diversity. Phytochem 72: 689–699.

Qiang TX, Jiang ZH, Cai ZW. 2006. Highperformance liquid chromatography coupled with tandem mass spectrometry applied for metabolic study of ginsenoside Rb, on rat. Anal Biochem 352: 87– 96.

Qiao JS, Ding Y, Le G , Shi Y. 2013. Alterations of the gut microbiota in high-fat diet mice is strongly linked to oxidative stress. App Microbiol Biotech 97: 1689–1697.

Qin J, Li Y, Cai Z. 2012. Ametagenome-wide association study of gut microbiota in type 2 diabetes. Nature 490: 55–60.

Rad AH, Abbasalizadeh S, Vazifekhah S, Abbasalizadeh F, Hassanalilou T, Bastani P, Ejtahed HS, Soroush AR, Javadi M, Mortazavian AM, Khalili L. 2017. The future of diabetes management by healthy probiotic microorganisms. Cur Diabetes Rev 13: 582– 589. https://doi.org/10.2174/1573399812666 161014112515.

Ried K, Travica N, Sali A. 2018. The effect of kyolic aged garlic extract on gut microbiota, inflammation, and cardiovascular markers in hypertensives: the GarGIC Trial. Front Nutre 5: 122. doi: 10.3389/fnut.2018.00122.

Ríos-Covián D, Ruas-Madiedo P, Margolles A, Gueimonde M, De los Reyes-Gavilán CG, Salazar N. 2016. Intestinal short chain fatty acids and their link with diet and human health. Front Microbiol 7: 1–9. https://doi.org/ 10.3389/fmicb.2016.00185.

Rizzatti G, Ianiro G, Gasbarrini A. 2018. Antibiotic and modulation of microbiota: a new paradigm? J Clin Gastroenterol 52: S74–S77.

Roager HM, Vogt JK, KristensenM, LBS H, Ibrugger S, Maerkedahl RB, BahlMI, LindMV, Nielsen RL, Frøkiaer H, Gøbel RJ, Landberg R, Ross AB, Brix S, Holck J, Meyer AS, Sparholt MH, Christensen AF, Carvalho V, Hartmann B, Holst JJ, Rumessen JJ, Linneberg A, Sicheritz-Pontén T, Dalgaard MD, Blennow A, Frandsen HL,Villas- Bôas S, Kristiansen K, Vestergaard H, Hansen T, Ekstrøm CT, Ritz C, Nielsen HB, Pedersen OB, Gupta R, Lauritzen L, Licht TR. 2017. Whole grain-rich diet reduces body weight and systemic low-grade inflammation without inducing major changes of the gut microbiome: A randomised cross-over trial. Gut 68: 83–93. doi:10.1136/gutjnl-2017- 314786.

Ruan JQ, Leong WI, Yan R, Wang YT. 2010. Characterization of Metabolism and in Vitro permeability study of notoginsenoside R1 from radix notoginseng. J Agric Food Chem 58: 5770–5776.

Sabatino A, Regolisti G, Cosola C, Gesualdo L, Fiaccadori E. 2017. Intestinal microbiota in type 2 diabetes and chronic kidney disease. Curr Diab Rep 17: 16. https://doi.org/ 10.1007/s11892- 017-0841-z.

Salminen S, Bouley C, Boutron M-C, Cummings JH, Franck A, Gibson GR, Isolauri E, Moreau  MC, Roberfroid  M, Rowland  I. 1998. Functional food science and gastrointestinal physiology and function. Br J Nutr 80: 147–171. doi: 10.1079/ bjn19980108.

Salzman NH, Hung K, Haribhai D, Chu H, Karlsson-Sjöberg J, Amir E, Teggatz P, Barman M, Hayward M, Eastwood D, Stoel M, Zhou  Y, Sode rgren  E, Weinstock GM, Bevins CL, Williams CB, Bos NA. 2010. Enteric defensins are essential regulators of intestinal microbial ecology. Nat Immunol 11: 76–83. doi: 10.1038/ni.1825.

Sen S, Chakraborty R. J. 2017. Revival, modernization and integration of Indian traditional herbal medicine in clinical practice: Importance, challenges and future. Tradit. Complement Med 7: 234–244.

Sheng Y, . Zheng S, Ma T. Zhang C, Ou X, He X , Xu W, Huang K. 2017. Mulberry leaf alleviates streptozotocin-induced diabetic rats by attenuating NEFA signaling and modulating intestinalmicroflora. Sci Rep 7: Article no. 12041. https://doi.org/10.1038/ s41598-017-12245-2.

Shin JE, Bae EA, Lee YC, Ma JY, Kim DH. 2006. Estrogenic effect of main components kakkalide and tectoridin of puerariae flos and their metabolites. Biol Pharm Bull 29: 1202– 1206.

Shultz SR, Aziz NA, Yang L, Sun M, Macfabe DF, O’Brien TJ. 2015. Intracerebroventricular injection of propionic acid, an enteric metabolite implicated in autism, induces social abnormalities that do not differ between seizure-prone (FAST) and seizure-resistant (SLOW) rats. Behav Brain Res 278: 542– 548. doi: 10.1016/j.bbr.2014.10.050.

Singh A, Zapata RC, Pezeshki A, Reidelberger RD, Chelikani PK. 2018. Inulin fiber dosedependently modulates energy balance, glucose tolerance, gut microbiota, hormones and diet preference in high fat fed male rats. J Nutr Biochem 59: 142–152. https://doi.org/ 10.1016/j.jnutbio.2018.05.017.

Sivan A, Corrales L, Hubert N, Williams JB, Aquino-Michaels K, Earley ZM, Benyamin FW, Lei  YM, Jabri  B, Alegre  ML, Chang EB, Gajewski  TF.  2015.  Commensal Bifidobacterium promotes antitumor immunity and facilitates anti–PD-L1 efficacy. Science 350: 1084–1089. doi: 10.1126/ science.aac4255.

Slizewska K, Jus J, Barczynska R, Jurgon A. 2017. Effects of potato dextrin on the composition and metabolism of the gut microbiota in rats fed standard and high-fat diets. J Funct Foods 34: 398–407. https:// doi.org/10.1016/j.jff.2017.05.023.

Song Y, Liu C, Finegold SM. 2004. Real-time PCR quantitation of Clostridia in feces of autistic children. Appl Environ Microbiol 70: 6459–6465. doi: 10.1128/aem.70.11.6459- 6465.2004.

Staels B, Fonseca VA. 2009. Bile acids and metabolic regulation: Mechanisms and clinical responses to bile acid sequestration. Diabetes Care 32: S237–S245. doi: 10.2337/ dc09-s355.

Stepniak D, Koning F. 2006. Celiac diseasesandwiched between innate and adaptive immunity. Hum Immunol 67: 460–468. doi: 10.1016/j.humimm. 2006.03.011.

Taira S, Ikeda R, Yokota N, Osaka I, Sakamoto M, Kato M, Sahashi Y. 2010. Mass spectrometric imaging of ginsenosides localization in Panax ginseng root. Am J Chin Med 38: 485–493.

Tang D, Yu Y, Zheng X, Wu J, Li Y, Wu X, Du Q, Yin X. 2014. Comparative investigation of in vitro biotransformation of 14 components in Ginkgo biloba extract in normal, diabetes and diabetic nephropathy rat intestinal bacteria matrix. J Pharm Biomed Anal 100: 1–10.

Tap J, Mondot S, Levenez F, Pelletier E, Caron C, Furet Jean-Pierre, Ugarte E, MuñozTamayo R, Paslier DLE, Nalin R, Dore J, Leclerc M. 2009. Towards the human intestinal microbiota phylogenetic core. Environ Microbiol 11: 2574– 84. doi:10.1111/j.1462-2920.2009.01982.x.

Tawab MA, Bahr U, Karas M, Wurglics M, Schubert-Zsilavecz M. 2003. Degradation of ginsenosides in humans after oral administration. Drug Metab Dispos 31: 1065– 1071.

Ubeda C, Pamer EG. 2012. Antibiotics, microbiota, and immune defense. Trends Immunol 33: 459–466.

Vasiliauskas EA, Kam LY, Karp LC, Gaiennie J, Yang H, Targan SR. 2000. Marker antibody expression stratifies Crohns disease into immunologically homogeneous subgroups with distinct clinical characteristics. Gut 47: 487–496. doi: 10.1136/gut.47.4.487.

Wang CZ, Ni M, Sun S, Li XL, He H, Mehendale SR, Yuan CS. 2009. Detection of adulteration of notoginseng root extract with other Panax species by quantitative HPLC coupled with PCA. J Agric Food Chem 57: 2363–2367.

Wang J, Gao W, Zhang J, Huang T, Wen T, Zhang L, Huang L. 2011. Production of saponins and polysaccharides in the presence of lactalbumin hydrolysate in Panax quinquefolium L. cell cultures. Pl Gr Reg 63: 217–223. https://doi.org/10.1007/s10725- 010- 9518-1.

Wang M, Feng Q, Gong M, Yu J, Zhang Y, Zhang M, Hansen T, Sanchez G, Raes J, Falony G, Okuda S, Almeida M, LeChatelier E, Renault P, Pons N, Batto JM, Zhang Z, Chen H, Yang R, Zheng W, Li S, Yang H, Wang J, Ehrlich SD, Nielsen R, Pedersen O, Kristiansen K, Wang J. 2012. A metagenomewide association study of gut microbiota in type 2 diabetes. Nature 490: 55–60. https:// doi.org/10.1038/nature11450

Weiss EP, Jordan RC, Frese EM, Albert SG, DTV. 2017. Effects of weight loss on lean mass, strength, bone, and aerobic capacity. Med Sci Sports Exerc 49: 206–217.

World Health Organization. 2016. Global Reports on Diabetes. WHO Press, Geneva.

Wu N, Yang X, Zhang R, Li J, Xiao X, Hu Y, Chen Y, Yang F, Lu N, Wang Z, Luan C, Liu Y, Wang B, Xiang C, Wang Y, Zhao F, Gao GF, Wang S, Li L, Zhang H. 2013. Dysbiosis signature of fecal microbiota in colorectal cancer patients. Microb Ecol 66: 462–470. doi: 10.1007/s00248-013-0245-9

Yang L, Deng YH, Xu SJ, Zeng X. 2007. In vivo pharmacokinetic and metabolism studies of ginsenoside Rd. J Chromatogr Analy Tech Biomed Life Sci 854: 77–84.

Yui K, Kawasaki Y, Yamada H, Ogawa S. 2016. Oxidative stress and nitric oxide in autism spectrum disorder and other neuropsychiatric disorders. CNS Neurol Disord Drug Targets 15: 587–596.

Zhao H, Wan X, Chen JX. 2009. A mini review of traditional Chinese medicine for the treatment of depression in China. Am J Chin Med 37: 207–213.

Zhi Y Kho, Sunil K Lal. 2018. The human gut microbiome – A potential controller of wellness and disease. Frontiers Microbiol 9: Article 1835; doi: 10.3389/fmicb.2018.01835.

Zhou D, Pan Q, Shen F, Cao H, Ding W, Chen Y, Fan J. 2017. Total fecal microbiota transplantation alleviates high-fat diet-induced steatohepatitis in mice via beneficial regulation of gut microbiota. Sci Rep 8: 1–11. https:// doi.org/10.1038/s41598-017-01751-y.

Zhou Q. 2017. The Influence of Dendrobium Candidum Extract on Blood Glucose and the Intestinal Microflora in Diabetic Mice, Dalian Medical University, Dalian, China.

Zuo G, Guan T, Chen D, Li C, Jiang R, Luo C, Hu X, Wang Y, Wang J. 2009. Total saponins of Panax ginseng induces K562 cell differentiation by promoting internalization of the erythropoietin receptor. Am J Chin Med 37: 747–757.
 

Cite this article

Ajay Kumar Mathur, Archana Mathur. 2019. Maintenance of a balanced human gut microbiota - an emerging healthcare destination for herbal research. J Med Aromat Plant Sci 41: 1-30.
 

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